Welcome to ProteoGenomics Analysis ToolKit

Welcome to the ProteoGenomics Analysis ToolKit (PGATK), a framework for proteogenomics analysis. It provides a set of tools and bioinformatics pipelines to perform proteogenomics analysis using proteomics and RNA-Seq data.

Contents

• Introduction
• PGATK Tools
• PGATK NF-Core Workflows
• PGATK File Formats
• About